STRINGSTRING
ccdc39 protein (Ciona intestinalis) - STRING interaction network
"ccdc39" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc39Uncharacterized protein (238 aa)    
Predicted Functional Partners:
ENSCING00000022125
Uncharacterized protein (500 aa)
     
   
  0.610
ccdc40
Uncharacterized protein (864 aa)
     
   
  0.606
ENSCING00000008049
Uncharacterized protein (594 aa)
     
   
  0.570
ENSCING00000019448
Uncharacterized protein (376 aa)
     
   
  0.568
ENSCING00000008097
Uncharacterized protein (541 aa)
     
   
  0.568
Cin.13544
Uncharacterized protein (239 aa)
     
   
  0.552
ciic3
Thioredoxin domain-containing protein 3 homolog ; May be required during the final stages of sperm tail maturation. May act by reducing disulfide bonds within the sperm components (By similarity) (653 aa)
     
   
  0.549
ENSCING00000008117
Uncharacterized protein (348 aa)
     
   
  0.546
ci-rsp9
Uncharacterized protein LOC100179789 (276 aa)
     
   
  0.543
ENSCING00000004270
Uncharacterized protein (679 aa)
     
   
  0.537
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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