STRINGSTRING
ENSCING00000012454 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000012454" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000012454Uncharacterized protein (409 aa)    
Predicted Functional Partners:
ENSCING00000009574
Uncharacterized protein (754 aa)
       
      0.874
ENSCING00000003211
Uncharacterized protein (158 aa)
       
 
  0.599
ENSCING00000000989
Uncharacterized protein (192 aa)
           
  0.571
ENSCING00000020502
Zinc finger protein (579 aa)
       
      0.545
mapkk4
Mitogen-activated protein kinase kinase (475 aa)
       
      0.545
mapkk7
Mitogen-activated protein kinase kinase (478 aa)
       
      0.545
bmp2/4
Transforming growth factor beta superfamily signaling ligand precursor (376 aa)
           
  0.527
ENSCING00000015912
Uncharacterized protein (351 aa)
       
      0.442
ENSCING00000002932
Uncharacterized protein (290 aa)
       
      0.442
ENSCING00000000553
Uncharacterized protein (369 aa)
       
      0.442
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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