STRINGSTRING
ENSCING00000012550 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000012550" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000012550Uncharacterized protein (530 aa)    
Predicted Functional Partners:
ENSCING00000023156
Uncharacterized protein (278 aa)
   
 
  0.713
Cin.22965
Uncharacterized protein (300 aa)
     
  0.647
ENSCING00000008368
Uncharacterized protein ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (-COSH) of their C-terminus. The reaction probably involves hydrogen sulfide that is generated from t [...] (410 aa)
   
        0.496
ENSCING00000005249
Uncharacterized protein (1409 aa)
       
      0.491
ENSCING00000013953
Uncharacterized protein (219 aa)
   
 
  0.473
ENSCING00000003549
Uncharacterized protein (204 aa)
     
 
  0.463
ENSCING00000018402
Uncharacterized protein (252 aa)
     
 
  0.453
ENSCING00000004181
Uncharacterized protein (474 aa)
     
 
  0.453
ENSCING00000021708
Uncharacterized protein (188 aa)
   
        0.436
ENSCING00000022952
Uncharacterized protein (281 aa)
   
        0.436
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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