STRINGSTRING
ap-2-like1 protein (Ciona intestinalis) - STRING interaction network
"ap-2-like1" - Transcription factor protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ap-2-like1Transcription factor protein (596 aa)    
Predicted Functional Partners:
ENSCING00000003832
Uncharacterized protein (257 aa)
     
  0.625
ENSCING00000006304
Uncharacterized protein (297 aa)
     
  0.625
ENSCING00000010799
Uncharacterized protein (296 aa)
     
  0.625
ENSCING00000017967
Uncharacterized protein (163 aa)
       
    0.439
ENSCING00000010516
Uncharacterized protein (228 aa)
       
    0.439
ENSCING00000007170
Uncharacterized protein (960 aa)
       
    0.439
ENSCING00000006124
Uncharacterized protein (660 aa)
       
    0.439
cbp
Uncharacterized protein (1533 aa)
     
  0.424
myc
Transcription factor protein (681 aa)
       
    0.411
ENSCING00000020769
Uncharacterized protein (191 aa)
       
    0.410
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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