STRINGSTRING
ENSCING00000012671 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000012671" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000012671Uncharacterized protein (1026 aa)    
Predicted Functional Partners:
ENSCING00000004042
Uncharacterized protein (256 aa)
           
  0.579
ssrp1
FACT complex subunit SSRP1 ; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment [...] (603 aa)
     
      0.561
ENSCING00000016317
Uncharacterized protein (196 aa)
       
      0.561
ENSCING00000005537
Uncharacterized protein (716 aa)
       
      0.561
ENSCING00000006333
Uncharacterized protein (336 aa)
       
      0.561
ENSCING00000005628
Uncharacterized protein (714 aa)
       
      0.561
ENSCING00000003319
Zinc finger protein (349 aa)
       
      0.561
ENSCING00000023453
Uncharacterized protein (353 aa)
     
      0.548
LOC494392
Uncharacterized protein LOC494392 (131 aa)
     
      0.520
ENSCING00000020226
Uncharacterized protein (225 aa)
       
      0.493
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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