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rpy-1 protein (Ciona intestinalis) - STRING interaction network
"rpy-1" - Zinc finger protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpy-1Zinc finger protein (462 aa)    
Predicted Functional Partners:
ENSCING00000014739
Uncharacterized protein (181 aa)
       
      0.874
ENSCING00000006519
Uncharacterized protein (708 aa)
       
  0.661
ENSCING00000003415
Uncharacterized protein (582 aa)
       
  0.661
ENSCING00000013138
Uncharacterized protein (1903 aa)
         
  0.636
ENSCING00000008787
Nicotinic acetylcholine receptor subunit; Uncharacterized protein (499 aa)
       
  0.613
ENSCING00000011937
Nicotinic acetylcholine receptor subunit precursor (478 aa)
     
  0.573
ENSCING00000013109
Uncharacterized protein (203 aa)
           
  0.426
ENSCING00000001164
Uncharacterized protein (308 aa)
           
  0.412
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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