STRINGSTRING
Cin.22955 protein (Ciona intestinalis) - STRING interaction network
"Cin.22955" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.22955Uncharacterized protein (181 aa)    
Predicted Functional Partners:
ENSCING00000014002
Uncharacterized protein (568 aa)
     
  0.942
ENSCING00000021391
Uncharacterized protein (141 aa)
       
  0.891
ENSCING00000021695
Uncharacterized protein (442 aa)
     
  0.829
ENSCING00000019899
Uncharacterized protein (274 aa)
     
  0.794
ENSCING00000008187
Uncharacterized protein (193 aa)
     
  0.794
zf(c2hc)-2
Zinc finger protein (512 aa)
     
  0.794
ENSCING00000024909
Uncharacterized protein (146 aa)
     
  0.690
ENSCING00000008188
Uncharacterized protein (163 aa)
     
  0.690
LOC778671
Uncharacterized protein LOC778671 (319 aa)
       
  0.641
Cin.11699
Uncharacterized protein (172 aa)
       
  0.641
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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