STRINGSTRING
Cin.41209 protein (Ciona intestinalis) - STRING interaction network
"Cin.41209" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.41209Uncharacterized protein (256 aa)    
Predicted Functional Partners:
ENSCING00000021754
Uncharacterized protein (87 aa)
     
  0.969
ENSCING00000009630
Uncharacterized protein (338 aa)
     
  0.951
ENSCING00000024240
Uncharacterized protein (596 aa)
     
  0.924
ENSCING00000005978
Uncharacterized protein (180 aa)
     
  0.908
ENSCING00000007598
Uncharacterized protein (1885 aa)
     
  0.903
ENSCING00000016701
Uncharacterized protein (430 aa)
 
 
  0.881
ENSCING00000008574
Uncharacterized protein (309 aa)
     
  0.881
ENSCING00000004929
Uncharacterized protein (658 aa)
     
  0.877
ENSCING00000001048
Uncharacterized protein (464 aa)
     
  0.876
ENSCING00000022791
Uncharacterized protein (144 aa)
     
 
  0.867
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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