STRINGSTRING
Cin.45743 protein (Ciona intestinalis) - STRING interaction network
"Cin.45743" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.45743Uncharacterized protein (485 aa)    
Predicted Functional Partners:
ENSCING00000006084
Uncharacterized protein (725 aa)
   
  0.894
ENSCING00000002987
Uncharacterized protein (731 aa)
   
  0.894
ENSCING00000002850
Uncharacterized protein (2241 aa)
   
 
  0.862
ENSCING00000009497
Uncharacterized protein (622 aa)
   
 
  0.729
ENSCING00000004143
Uncharacterized protein (561 aa)
   
 
  0.729
ENSCING00000001543
Uncharacterized protein (633 aa)
   
 
  0.729
ENSCING00000006127
Uncharacterized protein (478 aa)
   
 
  0.718
ENSCING00000000893
Uncharacterized protein (413 aa)
 
 
  0.715
ENSCING00000000116
Uncharacterized protein (82 aa)
   
 
  0.715
acad8
Uncharacterized protein (214 aa)
   
 
  0.691
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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