STRINGSTRING
Cin.27894 protein (Ciona intestinalis) - STRING interaction network
"Cin.27894" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.27894Uncharacterized protein (434 aa)    
Predicted Functional Partners:
LOC494358
Uncharacterized protein (1243 aa)
     
 
  0.949
capza
Uncharacterized protein ; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments (284 aa)
     
      0.681
capzb
Uncharacterized protein (273 aa)
     
      0.528
ENSCING00000002130
Uncharacterized protein (994 aa)
       
    0.481
ENSCING00000009439
Uncharacterized protein (358 aa)
           
  0.438
ENSCING00000002259
Uncharacterized protein (360 aa)
           
  0.438
ENSCING00000001709
Uncharacterized protein (201 aa)
           
  0.438
ENSCING00000021058
Uncharacterized protein (352 aa)
           
  0.422
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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