STRINGSTRING
Cin.26536 protein (Ciona intestinalis) - STRING interaction network
"Cin.26536" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.26536Uncharacterized protein (211 aa)    
Predicted Functional Partners:
Cin.37824
Uncharacterized protein (353 aa)
 
  0.887
ENSCING00000005020
Uncharacterized protein (395 aa)
 
  0.863
ENSCING00000023410
Uncharacterized protein (1269 aa)
              0.654
ENSCING00000002908
Uncharacterized protein (621 aa)
       
  0.599
ENSCING00000024391
Uncharacterized protein (674 aa)
   
 
  0.569
ENSCING00000019787
Uncharacterized protein (207 aa)
       
  0.565
ENSCING00000011806
Uncharacterized protein (663 aa)
       
  0.565
ENSCING00000009641
Uncharacterized protein (506 aa)
       
  0.565
ENSCING00000002238
Phosphoglycerate kinase (416 aa)
   
 
  0.493
pgm2
Uncharacterized protein (611 aa)
   
  0.481
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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