STRINGSTRING
foxi-c protein (Ciona intestinalis) - STRING interaction network
"foxi-c" - Transcription factor protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
foxi-cTranscription factor protein (581 aa)    
Predicted Functional Partners:
rps6ka5
Uncharacterized protein (813 aa)
       
  0.778
ENSCING00000014665
Uncharacterized protein (143 aa)
       
  0.778
ENSCING00000008043
Uncharacterized protein (512 aa)
       
  0.778
ENSCING00000006077
Uncharacterized protein (346 aa)
       
  0.778
rps6ka3
Ribosomal protein S6 kinase (730 aa)
       
  0.778
ENSCING00000022452
Uncharacterized protein (139 aa)
     
  0.690
ENSCING00000009174
Uncharacterized protein (224 aa)
     
  0.690
ENSCING00000006693
Uncharacterized protein (292 aa)
     
  0.690
ENSCING00000006507
Uncharacterized protein (161 aa)
     
  0.690
ENSCING00000005978
Uncharacterized protein (180 aa)
     
  0.690
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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