STRINGSTRING
ENSCING00000013216 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000013216" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000013216Uncharacterized protein (467 aa)    
Predicted Functional Partners:
ENSCING00000010780
Uncharacterized protein (430 aa)
     
  0.925
eif4a3
Uncharacterized protein (410 aa)
     
  0.842
gmps
Uncharacterized protein (688 aa)
     
        0.813
ENSCING00000008648
Uncharacterized protein (376 aa)
           
  0.582
bat1
Uncharacterized protein (427 aa)
     
  0.531
ENSCING00000008043
Uncharacterized protein (512 aa)
     
  0.507
ddx5
Uncharacterized protein (572 aa)
     
  0.501
ENSCING00000012141
Uncharacterized protein (240 aa)
     
  0.463
Cin.19027
Uncharacterized protein (241 aa)
     
  0.463
ENSCING00000008750
Uncharacterized protein (573 aa)
     
  0.463
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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