STRINGSTRING
ENSCING00000013220 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000013220" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000013220Uncharacterized protein (894 aa)    
Predicted Functional Partners:
ogt
Uncharacterized protein (1027 aa)
     
 
  0.643
rev-erb
Nuclear receptor (597 aa)
     
        0.576
ENSCING00000023705
Uncharacterized protein (587 aa)
     
 
  0.555
hexb
Uncharacterized protein (538 aa)
       
  0.553
ENSCING00000004308
Uncharacterized protein (535 aa)
       
  0.553
ENSCING00000005422
Uncharacterized protein (344 aa)
       
  0.514
ENSCING00000013889
Uncharacterized protein (403 aa)
       
  0.514
ENSCING00000005153
Uncharacterized protein ; Plays an important role in the degradation of dermatan and keratan sulfates (676 aa)
   
   
  0.511
gfpt1
Uncharacterized protein (689 aa)
     
   
  0.444
oat
Uncharacterized protein (443 aa)
           
  0.441
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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