STRINGSTRING
ci-tlr2 protein (Ciona intestinalis) - STRING interaction network
"ci-tlr2" - Toll-like receptor 2 in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ci-tlr2Toll-like receptor 2 (947 aa)    
Predicted Functional Partners:
ENSCING00000001196
Uncharacterized protein (229 aa)
     
  0.967
fras1
Uncharacterized protein (3955 aa)
     
  0.854
ENSCING00000022162
Adenylyl cyclase-associated protein (481 aa)
       
  0.853
rcl1
Rac and Cdc42-like 1 protein (194 aa)
   
  0.852
LOC445702
Rac1 protein (192 aa)
   
  0.852
rhou
Wrch protein (259 aa)
     
  0.852
ENSCING00000024904
Uncharacterized protein (116 aa)
     
  0.852
rac2
Rac2 protein (192 aa)
     
  0.852
rhob
Rif protein (249 aa)
     
  0.852
LOC445704
TC10 protein (193 aa)
     
  0.852
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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