STRINGSTRING
ENSCING00000013269 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000013269" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000013269Uncharacterized protein (154 aa)    
Predicted Functional Partners:
dnajc10
Uncharacterized protein (817 aa)
   
 
  0.768
ENSCING00000012827
Uncharacterized protein (287 aa)
   
   
  0.664
ENSCING00000003359
Uncharacterized protein (273 aa)
 
   
  0.570
ENSCING00000023160
Uncharacterized protein (126 aa)
           
  0.568
ENSCING00000011420
Uncharacterized protein (174 aa)
           
  0.568
ENSCING00000008045
Uncharacterized protein (128 aa)
   
 
  0.524
aptx
Aprataxin ; DNA-binding protein involved in single-strand DNA break repair, double-strand DNA break repair and base excision repair. Resolves abortive DNA ligation intermediates formed either at base excision sites, or when DNA ligases attempt to repair non- ligatable breaks induced by reactive oxygen species. Catalyzes the release of adenylate groups covalently linked to 5’-phosphate termini, resulting in the production of 5’-phosphate termini that can be efficiently rejoined (By similarity) (380 aa)
     
   
  0.517
ENSCING00000008154
S-adenosylmethionine decarboxylase proenzyme (348 aa)
       
      0.511
ENSCING00000019791
Uncharacterized protein (643 aa)
     
 
  0.487
ENSCING00000018264
Uncharacterized protein (880 aa)
     
 
  0.487
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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