STRINGSTRING
ENSCING00000013296 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000013296" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000013296Uncharacterized protein (286 aa)    
Predicted Functional Partners:
ENSCING00000009610
Uncharacterized protein (226 aa)
 
  0.740
Cin.34701
Uncharacterized protein (215 aa)
 
  0.740
ENSCING00000004609
Uncharacterized protein (237 aa)
 
  0.738
ENSCING00000021373
Uncharacterized protein (193 aa)
 
  0.731
ENSCING00000007504
Uncharacterized protein (660 aa)
   
 
  0.726
dpyd
Uncharacterized protein (1024 aa)
   
   
  0.590
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
   
  0.581
dnajc10
Uncharacterized protein (817 aa)
   
 
  0.554
oxct1
Succinyl-CoA-3-ketoacid-coenzyme A transferase ; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate (505 aa)
           
  0.550
ENSCING00000009202
Uncharacterized protein (489 aa)
         
  0.532
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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