STRINGSTRING
pfkfb1 protein (Ciona intestinalis) - STRING interaction network
"pfkfb1" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pfkfb1Uncharacterized protein (448 aa)    
Predicted Functional Partners:
pfkm
6-phosphofructokinase ; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis (758 aa)
   
  0.954
ENSCING00000006724
Uncharacterized protein (482 aa)
     
  0.945
ENSCING00000005335
Mannose-6-phosphate isomerase (408 aa)
     
    0.907
ENSCING00000013560
Uncharacterized protein (261 aa)
       
  0.896
ENSCING00000009202
Uncharacterized protein (489 aa)
   
 
  0.780
ENSCING00000006522
Uncharacterized protein (367 aa)
     
  0.767
prkca
Protein kinase C (657 aa)
     
 
  0.693
ENSCING00000025038
Uncharacterized protein (314 aa)
     
  0.672
ENSCING00000002850
Uncharacterized protein (2241 aa)
   
   
  0.594
ENSCING00000007699
Uncharacterized protein (983 aa)
   
   
  0.578
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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