STRINGSTRING
ENSCING00000013447 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000013447" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000013447Uncharacterized protein (436 aa)    
Predicted Functional Partners:
ENSCING00000011718
Uncharacterized protein (683 aa)
     
      0.670
ENSCING00000008813
Uncharacterized protein (703 aa)
   
 
  0.636
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
        0.541
ENSCING00000016280
Uncharacterized protein (261 aa)
           
  0.437
ENSCING00000012532
Uncharacterized protein (228 aa)
           
  0.435
ENSCING00000011386
Uncharacterized protein (242 aa)
           
  0.435
ENSCING00000022242
Uncharacterized protein (159 aa)
     
   
  0.405
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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