STRINGSTRING
ENSCING00000013561 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000013561" - Transcription factor protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000013561Transcription factor protein (301 aa)    
Predicted Functional Partners:
six12
Transcription factor protein (238 aa)
     
 
  0.512
six36
Uncharacterized protein (403 aa)
     
 
  0.512
six45
Transcription factor protein (555 aa)
     
 
  0.512
ENSCING00000008035
Zinc finger protein Ci-ZF(ZZ/RING)-1 (778 aa)
       
 
  0.504
zf(zz)-7
Uncharacterized protein; Zinc finger protein (619 aa)
       
 
  0.504
ENSCING00000023066
Uncharacterized protein (201 aa)
     
 
  0.475
tbx6a
T-box transcription factor Ci-Tbx6a (524 aa)
     
 
  0.475
tbx2/3
T-box containing transcription factor (803 aa)
     
 
  0.475
tbx6b
T-box transcription factor Ci-Tbx6b (558 aa)
     
 
  0.475
mT
T-box transcription factor Ci-mT (812 aa)
     
 
  0.475
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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