STRINGSTRING
ENSCING00000013562 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000013562" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000013562Uncharacterized protein (381 aa)    
Predicted Functional Partners:
ENSCING00000021133
Uncharacterized protein (278 aa)
   
    0.495
sir2-c
Uncharacterized protein (737 aa)
   
    0.495
sir2-a
Uncharacterized protein (363 aa)
   
    0.489
LOC778889
Uncharacterized protein (319 aa)
   
    0.489
ENSCING00000022308
Uncharacterized protein (357 aa)
   
    0.489
ci-sir2-e
Uncharacterized protein; Zinc finger protein (339 aa)
   
    0.489
ENSCING00000010029
Histone H2A (141 aa)
       
  0.477
ENSCING00000001161
Uncharacterized protein ; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (121 aa)
       
  0.428
ENSCING00000008022
Uncharacterized protein (1310 aa)
     
 
  0.401
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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