STRINGSTRING
ENSCING00000018970 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000018970" - Uncharacterized protein in Ciona intestinalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
ENSCING00000018970Uncharacterized protein ; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5’ of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding (466 aa)    
Predicted Functional Partners:
ENSCING00000004125
Uncharacterized protein (558 aa)
     
   
  0.641
ENSCING00000008473
Uncharacterized protein ; Methylates the 2’-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs (322 aa)
     
   
  0.621
ENSCING00000002884
Uncharacterized protein (560 aa)
     
   
  0.592
ENSCING00000018222
Uncharacterized protein (303 aa)
     
   
  0.576
ENSCING00000009639
Uncharacterized protein (603 aa)
     
 
  0.571
ENSCING00000014698
Uncharacterized protein (395 aa)
 
 
   
  0.569
ENSCING00000024037
Uncharacterized protein (131 aa)
     
 
  0.564
ENSCING00000023385
Uncharacterized protein (378 aa)
     
   
  0.561
ENSCING00000009504
Uncharacterized protein (654 aa)
     
   
  0.561
ENSCING00000007283
Uncharacterized protein (263 aa)
     
   
  0.557
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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