STRINGSTRING
pou2 protein (Ciona intestinalis) - STRING interaction network
"pou2" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pou2Uncharacterized protein (315 aa)    
Predicted Functional Partners:
foxa-b
Uncharacterized protein (235 aa)
       
  0.514
fkh
Transcription factor protein (633 aa)
       
  0.514
ENSCING00000003348
Uncharacterized protein (447 aa)
       
    0.466
ENSCING00000011871
Uncharacterized protein (210 aa)
       
  0.454
Cin.26664
Uncharacterized protein (316 aa)
       
  0.454
ENSCING00000009619
Uncharacterized protein (314 aa)
       
  0.452
ENSCING00000019359
Uncharacterized protein (141 aa)
         
  0.439
ENSCING00000007884
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1814 aa)
       
    0.439
ENSCING00000020955
Uncharacterized protein (194 aa)
       
    0.431
ints9
Uncharacterized protein (281 aa)
       
    0.431
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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