STRINGSTRING
nf-e2 protein (Ciona intestinalis) - STRING interaction network
"nf-e2" - Transcription factor protein isoform 2 in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nf-e2Transcription factor protein isoform 2 (922 aa)    
Predicted Functional Partners:
ENSCING00000008356
Uncharacterized protein (580 aa)
       
 
  0.615
insulinr
Tyrosine-protein kinase receptor (479 aa)
       
 
  0.458
foxa-b
Uncharacterized protein (235 aa)
           
  0.443
fkh
Transcription factor protein (633 aa)
           
  0.443
LOC778715
Transcription factor protein (1039 aa)
           
  0.435
gclc
Uncharacterized protein (629 aa)
           
  0.435
ENSCING00000005931
Uncharacterized protein (615 aa)
           
  0.435
ENSCING00000003707
Uncharacterized protein (637 aa)
           
  0.435
ENSCING00000005769
Uncharacterized protein (253 aa)
           
  0.430
LOC778664
Transcription factor protein (429 aa)
       
  0.407
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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