STRINGSTRING
ENSCING00000005985 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000005985" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000005985Uncharacterized protein ; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (1233 aa)    
Predicted Functional Partners:
ENSCING00000003660
Structural maintenance of chromosomes protein (1253 aa)
     
  0.999
ENSCING00000006416
Uncharacterized protein (709 aa)
     
  0.997
ENSCING00000009196
Uncharacterized protein (957 aa)
     
  0.997
ENSCING00000000171
Structural maintenance of chromosomes protein (1202 aa)
     
  0.997
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
     
   
  0.989
ENSCING00000008151
Uncharacterized protein (1070 aa)
     
  0.882
ENSCING00000021040
Uncharacterized protein (190 aa)
     
  0.879
ENSCING00000024865
Uncharacterized protein (105 aa)
     
  0.879
ENSCING00000004299
Uncharacterized protein (922 aa)
     
  0.879
ENSCING00000003687
Uncharacterized protein (1175 aa)
     
  0.878
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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