STRINGSTRING
ephe protein (Ciona intestinalis) - STRING interaction network
"ephe" - Ephrin receptor epsilon precursor in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
epheEphrin receptor epsilon precursor (1006 aa)    
Predicted Functional Partners:
ephrina-d
Ephrin precursor (278 aa)
     
  0.988
ephrina-b
Ephrin precursor (265 aa)
     
  0.970
ENSCING00000002850
Uncharacterized protein (2241 aa)
   
  0.970
ephrin-a
Ephrin precursor (248 aa)
     
  0.967
ephrinb
Ephrin precursor (359 aa)
     
  0.966
ephrina-c
Ephrin precursor (264 aa)
     
  0.957
ENSCING00000005522
Uncharacterized protein (720 aa)
     
  0.926
ENSCING00000023687
Uncharacterized protein (820 aa)
   
  0.862
ENSCING00000003255
Uncharacterized protein (440 aa)
     
0.801
ENSCING00000009221
Uncharacterized protein (572 aa)
     
  0.775
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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