STRINGSTRING
ENSCING00000013835 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000013835" - Transcription factor protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000013835Transcription factor protein (258 aa)    
Predicted Functional Partners:
n
Notch precursor (2549 aa)
       
  0.595
ENSCING00000004186
Uncharacterized protein (475 aa)
       
  0.520
su(h)
Suppressor of hairless homolog ; Transcriptional regulator that plays a central role in Notch signaling, a signaling pathway involved in cell-cell communication that regulates a broad spectrum of cell-fate determinations. Acts as a transcriptional repressor when it is not associated with Notch proteins. When associated with some Notch protein, it acts as a transcriptional activator that activates transcription of Notch target genes (By similarity). Required for the transcriptional expression of Brachyury, suggesting that it participates in notochord differentiation (554 aa)
       
  0.520
ENSCING00000003322
Uncharacterized protein (162 aa)
       
    0.500
betaTrCP
Beta-transducin repeat-containing homologue protein (621 aa)
       
      0.476
ENSCING00000005509
Uncharacterized protein (773 aa)
       
      0.476
groucho2
Groucho (835 aa)
       
  0.436
groucho1
Groucho (847 aa)
       
  0.436
ENSCING00000011582
Uncharacterized protein (236 aa)
       
    0.419
gsk
Glycogen synthase kinase alpha/beta (407 aa)
       
    0.419
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (18%) [HD]