STRINGSTRING
ENSCING00000013923 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000013923" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000013923Uncharacterized protein (190 aa)    
Predicted Functional Partners:
ENSCING00000012827
Uncharacterized protein (287 aa)
   
   
  0.894
gcn1l1
Uncharacterized protein (2637 aa)
     
 
  0.813
Cin.27617
Uncharacterized protein (535 aa)
   
   
  0.806
ENSCING00000007544
Uncharacterized protein (1596 aa)
   
   
  0.761
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
   
  0.759
if5-1
Translation initiation factor (267 aa)
     
  0.718
ENSCING00000006234
Uncharacterized protein (305 aa)
     
 
  0.668
ENSCING00000023790
Uncharacterized protein (1081 aa)
   
   
  0.657
gmps
Uncharacterized protein (688 aa)
   
   
  0.654
ENSCING00000000152
Uncharacterized protein (549 aa)
   
 
  0.651
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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