STRINGSTRING
scmh1 protein (Ciona intestinalis) - STRING interaction network
"scmh1" - Sex comb on midleg like protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scmh1Sex comb on midleg like protein (713 aa)    
Predicted Functional Partners:
ENSCING00000007979
Uncharacterized protein (301 aa)
     
  0.715
ENSCING00000006948
Uncharacterized protein (424 aa)
     
 
  0.708
ENSCING00000022254
Uncharacterized protein (99 aa)
       
    0.673
ENSCING00000017967
Uncharacterized protein (163 aa)
       
    0.669
ENSCING00000014546
Uncharacterized protein (613 aa)
     
 
  0.661
ENSCING00000000533
Uncharacterized protein (302 aa)
       
0.635
ENSCING00000018033
Uncharacterized protein (354 aa)
       
  0.612
ENSCING00000004208
Uncharacterized protein (399 aa)
     
0.553
ENSCING00000021059
Uncharacterized protein (223 aa)
       
  0.538
ENSCING00000024184
Uncharacterized protein (264 aa)
     
 
  0.524
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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