STRINGSTRING
ENSCING00000014054 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000014054" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000014054Uncharacterized protein ; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (294 aa)    
Predicted Functional Partners:
gmps
Uncharacterized protein (688 aa)
   
   
  0.780
ENSCING00000004980
Uncharacterized protein (817 aa)
     
      0.670
ENSCING00000006190
Ribonuclease ; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (292 aa)
     
 
  0.641
ENSCING00000018708
Uncharacterized protein (1528 aa)
     
  0.587
ENSCING00000019714
Uncharacterized protein (270 aa)
     
   
  0.584
ENSCING00000023871
Uncharacterized protein (197 aa)
     
   
  0.564
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
     
 
  0.554
pgm1
Uncharacterized protein (560 aa)
       
  0.551
ENSCING00000018506
Uncharacterized protein (258 aa)
   
   
  0.546
ENSCING00000018904
Uncharacterized protein (506 aa)
   
   
  0.546
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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