STRINGSTRING
erm protein (Ciona intestinalis) - STRING interaction network
"erm" - Ezrin/radixin/moesin in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ermEzrin/radixin/moesin (ERM)-like protein (582 aa)    
Predicted Functional Partners:
ENSCING00000002098
Uncharacterized protein (296 aa)
       
  0.851
ENSCING00000004083
Uncharacterized protein (418 aa)
     
 
  0.813
stk38l
Uncharacterized protein (452 aa)
     
 
  0.697
rhoa
RhoA protein (193 aa)
     
  0.650
ENSCING00000007043
Uncharacterized protein (619 aa)
     
  0.567
ENSCING00000021169
Uncharacterized protein (223 aa)
     
  0.551
Cin.32434
Uncharacterized protein (236 aa)
     
  0.536
prkca
Protein kinase C (657 aa)
     
  0.532
ENSCING00000016554
Uncharacterized protein (469 aa)
       
  0.522
ENSCING00000007077
Uncharacterized protein (1152 aa)
     
  0.522
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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