STRINGSTRING
Cin.49068 protein (Ciona intestinalis) - STRING interaction network
"Cin.49068" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.49068Uncharacterized protein (251 aa)    
Predicted Functional Partners:
ENSCING00000007232
Uncharacterized protein (320 aa)
       
  0.880
ENSCING00000024111
Uncharacterized protein (315 aa)
     
  0.639
ENSCING00000020815
Uncharacterized protein (347 aa)
     
  0.639
ENSCING00000012574
Uncharacterized protein (171 aa)
     
  0.639
ENSCING00000007605
Uncharacterized protein (381 aa)
     
  0.639
zf(an1)-3
Uncharacterized protein (608 aa)
     
  0.639
ENSCING00000012910
Uncharacterized protein ; ATPase required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail- anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for [...] (341 aa)
       
 
  0.583
ENSCING00000003661
Glucose-6-phosphate 1-dehydrogenase ; Catalyzes the rate-limiting step of the oxidative pentose-phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis (482 aa)
       
      0.552
ENSCING00000008783
Uncharacterized protein (527 aa)
     
  0.515
ENSCING00000022971
Uncharacterized protein (201 aa)
           
  0.506
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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