STRINGSTRING
EIF6 protein (Ciona intestinalis) - STRING interaction network
"EIF6" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIF6Uncharacterized protein ; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis (245 aa)    
Predicted Functional Partners:
gtpbp4
Nucleolar GTP-binding protein 1 ; Involved in the biogenesis of the 60S ribosomal subunit (639 aa)
   
 
  0.966
ENSCING00000008370
Uncharacterized protein (296 aa)
     
 
  0.962
ENSCING00000010738
Uncharacterized protein (538 aa)
     
 
  0.961
rpl3
Uncharacterized protein (411 aa)
     
 
  0.957
ENSCING00000008548
Uncharacterized protein (682 aa)
     
 
  0.956
ENSCING00000009310
Uncharacterized protein (191 aa)
   
      0.952
ENSCING00000018871
Uncharacterized protein (152 aa)
     
 
  0.951
ENSCING00000007209
Uncharacterized protein (246 aa)
     
 
  0.943
ENSCING00000019083
Uncharacterized protein (340 aa)
     
 
  0.940
ENSCING00000016546
Uncharacterized protein (71 aa)
     
 
  0.930
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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