STRINGSTRING
whsc1 protein (Ciona intestinalis) - STRING interaction network
"whsc1" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
whsc1Uncharacterized protein (543 aa)    
Predicted Functional Partners:
ENSCING00000009221
Uncharacterized protein (572 aa)
     
  0.831
ENSCING00000006948
Uncharacterized protein (424 aa)
     
  0.802
ENSCING00000003432
Uncharacterized protein (1219 aa)
     
  0.781
ENSCING00000023687
Uncharacterized protein (820 aa)
     
  0.753
ash2-like
Ash2-like protein (352 aa)
     
  0.734
ENSCING00000008243
Uncharacterized protein ; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (1009 aa)
   
  0.713
ENSCING00000019899
Uncharacterized protein (274 aa)
     
  0.712
ENSCING00000021695
Uncharacterized protein (442 aa)
     
  0.702
ENSCING00000008187
Uncharacterized protein (193 aa)
     
  0.702
zf(c2hc)-2
Zinc finger protein (512 aa)
     
  0.702
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (7%) [HD]