STRINGSTRING
ENSCING00000008192 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000008192" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000008192Uncharacterized protein (280 aa)    
Predicted Functional Partners:
ENSCING00000003142
Uncharacterized protein (371 aa)
     
 
  0.965
ENSCING00000005541
Uncharacterized protein (492 aa)
     
 
    0.900
ENSCING00000022221
Uncharacterized protein (374 aa)
         
    0.900
ENSCING00000007566
Uncharacterized protein (382 aa)
     
 
0.850
ENSCING00000017984
Uncharacterized protein (377 aa)
     
   
  0.575
ENSCING00000008384
Uncharacterized protein (380 aa)
     
   
  0.575
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
   
  0.513
ENSCING00000018824
Uncharacterized protein (278 aa)
     
 
  0.495
ENSCING00000000245
Uncharacterized protein (404 aa)
     
 
  0.495
ENSCING00000023383
Uncharacterized protein (1216 aa)
     
   
  0.469
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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