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ENSCING00000014388 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000014388" - Cin-mir-4122 in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000014388Cin-mir-4122 (834 aa)    
Predicted Functional Partners:
nf45
NF45 protein (367 aa)
     
 
0.930
ENSCING00000002697
Uncharacterized protein (427 aa)
     
  0.524
ENSCING00000003319
Zinc finger protein (349 aa)
       
    0.479
ENSCING00000001798
Uncharacterized protein (365 aa)
     
    0.447
ENSCING00000002585
Uncharacterized protein (764 aa)
     
    0.441
Cin.27705
Uncharacterized protein (413 aa)
     
  0.440
dhx36
Uncharacterized protein (534 aa)
     
  0.440
ENSCING00000002337
Uncharacterized protein (375 aa)
       
    0.439
ENSCING00000004814
Uncharacterized protein (807 aa)
     
 
    0.438
ENSCING00000000337
Uncharacterized protein (1164 aa)
     
 
  0.433
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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