STRINGSTRING
Cin.23642 protein (Ciona intestinalis) - STRING interaction network
"Cin.23642" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.23642Uncharacterized protein (270 aa)    
Predicted Functional Partners:
zf(zz)-4
Zinc finger protein ZF(ZZ)-4 (537 aa)
       
  0.887
ENSCING00000019207
Uncharacterized protein (358 aa)
     
   
  0.617
ENSCING00000013107
Uncharacterized protein (353 aa)
     
 
  0.613
ENSCING00000013105
Uncharacterized protein (326 aa)
     
 
  0.613
actn2
Uncharacterized protein (927 aa)
       
  0.568
ENSCING00000007077
Uncharacterized protein (1152 aa)
       
 
  0.544
ENSCING00000013757
Uncharacterized protein LOC100176380 (388 aa)
           
  0.437
ENSCING00000024611
Uncharacterized protein (2009 aa)
         
  0.402
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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