STRINGSTRING
pgm2 protein (Ciona intestinalis) - STRING interaction network
"pgm2" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgm2Uncharacterized protein (611 aa)    
Predicted Functional Partners:
ENSCING00000008612
Uncharacterized protein (318 aa)
   
 
  0.960
pgm1
Uncharacterized protein (560 aa)
   
  0.953
pygb
Phosphorylase ; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (866 aa)
   
 
  0.941
ENSCING00000006724
Uncharacterized protein (482 aa)
     
 
  0.932
ENSCING00000007581
Uncharacterized protein (631 aa)
   
  0.929
ENSCING00000000668
Uncharacterized protein (248 aa)
   
 
  0.914
ENSCING00000002375
Ribose-phosphate pyrophosphokinase (342 aa)
   
 
  0.913
ENSCING00000006080
Uncharacterized protein (252 aa)
   
 
  0.913
ENSCING00000000238
Uncharacterized protein (449 aa)
     
 
    0.900
ENSCING00000023499
Uncharacterized protein (349 aa)
         
    0.900
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (6%) [HD]