STRINGSTRING
Cin.26920 protein (Ciona intestinalis) - STRING interaction network
"Cin.26920" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.26920Uncharacterized protein (220 aa)    
Predicted Functional Partners:
gbe1
Uncharacterized protein (693 aa)
     
        0.512
ENSCING00000018363
Uncharacterized protein (672 aa)
     
        0.512
ENSCING00000011709
Uncharacterized protein (644 aa)
     
        0.512
ENSCING00000014534
Uncharacterized protein (673 aa)
     
        0.512
ENSCING00000005707
Uncharacterized protein (679 aa)
     
        0.512
ENSCING00000000748
Uncharacterized protein (649 aa)
     
        0.512
ENSCING00000004381
Uncharacterized protein (332 aa)
           
  0.443
asak
ATP sulfurylase/APS kinase (618 aa)
           
  0.432
ENSCING00000018123
Uncharacterized protein (71 aa)
   
          0.427
ENSCING00000005500
Uncharacterized protein (285 aa)
     
   
  0.404
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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