STRINGSTRING
creb/atf-d protein (Ciona intestinalis) - STRING interaction network
"creb/atf-d" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
creb/atf-dUncharacterized protein (408 aa)    
Predicted Functional Partners:
ENSCING00000007631
Uncharacterized protein (525 aa)
       
  0.736
ENSCING00000009590
Uncharacterized protein (659 aa)
       
  0.711
xbpa
Transcription factor protein (309 aa)
       
 
  0.685
ENSCING00000009665
Uncharacterized protein (664 aa)
       
  0.595
mbtps1
Uncharacterized protein (977 aa)
       
  0.577
hspa12a
Uncharacterized protein (547 aa)
       
  0.546
hsp70
Heat shock protein 70 (627 aa)
       
  0.546
Cin.36228
Uncharacterized protein (240 aa)
           
  0.524
ENSCING00000007292
Uncharacterized protein (722 aa)
         
  0.504
ENSCING00000008071
Uncharacterized protein (425 aa)
         
  0.502
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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