STRINGSTRING
Cin.23142 protein (Ciona intestinalis) - STRING interaction network
"Cin.23142" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.23142Uncharacterized protein (317 aa)    
Predicted Functional Partners:
ENSCING00000004935
Uncharacterized protein (1704 aa)
           
  0.566
ENSCING00000018138
Uncharacterized protein (235 aa)
     
   
  0.535
ENSCING00000007417
Uncharacterized protein (445 aa)
     
   
  0.535
Cin.28772
Uncharacterized protein (228 aa)
     
   
  0.484
ENSCING00000020132
Uncharacterized protein (84 aa)
     
   
  0.463
hsp40
Heat shock protein 40 (313 aa)
           
  0.441
ENSCING00000021621
Uncharacterized protein (319 aa)
           
  0.435
ENSCING00000016182
Uncharacterized protein (182 aa)
           
  0.435
ENSCING00000005660
Uncharacterized protein (313 aa)
           
  0.414
ENSCING00000003945
Uncharacterized protein (308 aa)
           
  0.412
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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