STRINGSTRING
ENSCING00000014835 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000014835" - E3 ubiquitin-protein ligase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000014835E3 ubiquitin-protein ligase (910 aa)    
Predicted Functional Partners:
ENSCING00000013961
Uncharacterized protein (152 aa)
     
  0.961
r27a
R27a protein (155 aa)
       
  0.943
nedd4l
E3 ubiquitin-protein ligase (871 aa)
     
0.897
pax6
Homeobox transcription factor Pax6 (497 aa)
       
      0.874
ENSCING00000002281
scalloped/TEF1 protein (350 aa)
       
  0.858
ENSCING00000019408
Uncharacterized protein (85 aa)
       
  0.858
ENSCING00000003861
Uncharacterized protein (148 aa)
     
  0.854
ENSCING00000018711
Uncharacterized protein (148 aa)
     
  0.854
ENSCING00000003348
Uncharacterized protein (447 aa)
     
 
  0.845
deltex
Deltex protein (525 aa)
       
  0.844
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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