STRINGSTRING
gamt1 protein (Ciona intestinalis) - STRING interaction network
"gamt1" - Guanidinoacetate methyltransferase-1 in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gamt1Guanidinoacetate methyltransferase-1 (235 aa)    
Predicted Functional Partners:
ENSCING00000014878
Uncharacterized protein (410 aa)
   
 
  0.908
ENSCING00000008838
Uncharacterized protein (362 aa)
         
  0.903
ckm
Creatine kinase (377 aa)
         
  0.900
ENSCING00000014902
Uncharacterized protein (232 aa)
   
   
 
0.801
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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