STRINGSTRING
ENSCING00000001520 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000001520" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000001520Uncharacterized protein (130 aa)    
Predicted Functional Partners:
ENSCING00000001685
Uncharacterized protein (162 aa)
       
  0.986
ENSCING00000006501
Uncharacterized protein (778 aa)
     
  0.980
ENSCING00000022721
Uncharacterized protein (104 aa)
       
  0.969
ENSCING00000023849
Uncharacterized protein (145 aa)
     
  0.914
ENSCING00000007224
Uncharacterized protein (294 aa)
     
  0.914
ENSCING00000001372
Uncharacterized protein (100 aa)
       
  0.890
ENSCING00000025012
Uncharacterized protein (431 aa)
     
  0.859
ENSCING00000001669
Uncharacterized protein (461 aa)
     
 
  0.858
n
Notch precursor (2549 aa)
     
  0.854
zf(cxxc)-1
Zinc finger protein (818 aa)
     
  0.853
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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