STRINGSTRING
ENSCING00000015271 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000015271" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000015271Uncharacterized protein (102 aa)    
Predicted Functional Partners:
ENSCING00000007995
Uncharacterized protein (779 aa)
     
      0.910
prpf19
Uncharacterized protein (437 aa)
     
      0.909
ENSCING00000007909
Uncharacterized protein (478 aa)
     
      0.905
ENSCING00000001601
Uncharacterized protein (144 aa)
     
      0.862
ENSCING00000003455
Uncharacterized protein (482 aa)
     
 
  0.815
cdc40
Uncharacterized protein (504 aa)
     
      0.748
if-b
Intermediate filament protein IF-B (467 aa)
     
  0.714
ENSCING00000000897
Nuclear lamin (465 aa)
     
  0.714
Cin.22233
Uncharacterized protein (90 aa)
       
  0.706
ENSCING00000006747
Uncharacterized protein (656 aa)
     
 
  0.704
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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