STRINGSTRING
ENSCING00000015272 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000015272" - Transmembrane protein Vc569 precursor in Ciona intestinalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000015272Transmembrane protein Vc569 precursor (894 aa)    
Predicted Functional Partners:
ENSCING00000005406
Neuralized-a protein (544 aa)
       
  0.952
n
Notch precursor (2549 aa)
       
0.691
ENSCING00000011763
Uncharacterized protein (761 aa)
     
  0.613
zf(zz)-7
Uncharacterized protein; Zinc finger protein (619 aa)
       
  0.610
ENSCING00000008035
Zinc finger protein Ci-ZF(ZZ/RING)-1 (778 aa)
       
  0.585
delta
Delta protein ; Putative Notch ligand involved in the mediation of Notch signaling (706 aa)
     
  0.497
ENSCING00000004186
Uncharacterized protein (475 aa)
     
 
  0.491
su(h)
Suppressor of hairless homolog ; Transcriptional regulator that plays a central role in Notch signaling, a signaling pathway involved in cell-cell communication that regulates a broad spectrum of cell-fate determinations. Acts as a transcriptional repressor when it is not associated with Notch proteins. When associated with some Notch protein, it acts as a transcriptional activator that activates transcription of Notch target genes (By similarity). Required for the transcriptional expression of Brachyury, suggesting that it participates in notochord differentiation (554 aa)
     
 
  0.491
ENSCING00000023687
Uncharacterized protein (820 aa)
       
  0.473
ENSCING00000009495
Uncharacterized protein (768 aa)
       
  0.459
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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