STRINGSTRING
Cin.27869 protein (Ciona intestinalis) - STRING interaction network
"Cin.27869" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.27869Uncharacterized protein (246 aa)    
Predicted Functional Partners:
ENSCING00000014118
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (262 aa)
     
  0.874
ENSCING00000009536
Uncharacterized protein (655 aa)
   
  0.843
ENSCING00000005638
Uncharacterized protein (217 aa)
   
  0.793
ENSCING00000000633
Uncharacterized protein (603 aa)
     
  0.755
ENSCING00000004516
Zinc finger protein ZF(C2H2)-102 ; Single-stranded DNA-dependent ATP-dependent helicase (706 aa)
     
 
  0.727
zf(parp)-2
DNA ligase (859 aa)
   
  0.719
ENSCING00000022588
Uncharacterized protein (112 aa)
     
  0.715
ENSCING00000006210
Uncharacterized protein (571 aa)
     
  0.715
ENSCING00000020135
Uncharacterized protein (480 aa)
     
  0.713
ENSCING00000008651
Uncharacterized protein (709 aa)
     
  0.689
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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