STRINGSTRING
ENSCING00000016005 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000016005" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000016005Uncharacterized protein (292 aa)    
Predicted Functional Partners:
ENSCING00000009221
Uncharacterized protein (572 aa)
     
  0.970
ENSCING00000009117
Uncharacterized protein (1237 aa)
     
  0.901
ENSCING00000003432
Uncharacterized protein (1219 aa)
     
  0.896
ENSCING00000019847
Zinc finger protein LOC723799 (1298 aa)
     
  0.842
rbbp4
Uncharacterized protein (431 aa)
     
  0.842
ENSCING00000021117
Uncharacterized protein (224 aa)
     
  0.805
ENSCING00000001161
Uncharacterized protein ; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (121 aa)
     
  0.774
ENSCING00000020313
Uncharacterized protein (344 aa)
     
  0.758
ENSCING00000022359
Histone H3 (136 aa)
   
  0.739
ENSCING00000013118
Uncharacterized protein (147 aa)
   
  0.739
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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