STRINGSTRING
ENSCING00000016062 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000016062" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000016062Uncharacterized protein (406 aa)    
Predicted Functional Partners:
ENSCING00000007889
Uncharacterized protein (735 aa)
       
  0.908
ENSCING00000011623
Uncharacterized protein (323 aa)
         
  0.901
ENSCING00000015053
Uncharacterized protein (188 aa)
     
  0.887
ENSCING00000022131
Uncharacterized protein (184 aa)
     
  0.884
Cin.52569
Histone deacetylase (404 aa)
   
  0.847
ENSCING00000022359
Histone H3 (136 aa)
     
  0.846
ENSCING00000013118
Uncharacterized protein (147 aa)
     
  0.846
ENSCING00000002753
Histone H3 (136 aa)
     
  0.846
ENSCING00000002360
Histone deacetylase (430 aa)
   
  0.843
ENSCING00000009221
Uncharacterized protein (572 aa)
     
  0.812
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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