STRINGSTRING
LOC778542 protein (Ciona intestinalis) - STRING interaction network
"LOC778542" - Transcription factor protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC778542Transcription factor protein (378 aa)    
Predicted Functional Partners:
e12/e47
Transcription factor protein (641 aa)
       
 
  0.789
LOC778534
Transcription factor protein (298 aa)
           
  0.422
ENSCING00000015684
Uncharacterized protein (457 aa)
           
  0.414
LOC778715
Transcription factor protein (1039 aa)
       
 
  0.401
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (8%) [HD]